Spatial structure of the β-casomorphin-8 molecule

This is an outdated version published on 2025-03-12. Read the most recent version.

Spatial structure of the β-casomorphin-8 molecule

Authors

  • Namiq Abdulavval Akhmedov Baku State University, Institute for PhysicalProblems
  • Larisa Ismail Ismailova
  • Namiq Abdulavval Akhmedov

DOI:

https://doi.org/10.13171/mjc02503121821akhmedov

Abstract

: Several exogenous peptides obtained from food have opioid-like properties. These peptides were called exorphins. The first known exorphins were obtained by in vitro pepsin hydrolysis of α-casein and wheat gluten. The conformational capabilities of the β-casomorphin-8 molecule (H-Tyr1-Pro2-Phe3-Pro4-Gly5-Pro6-İle7-Pro8-OH) have been studied by theoretical conformational analysis. The potential function of the system is chosen as the sum of non-bonded, electrostatic, and torsion interactions and the energy of hydrogen bonds. Low-energy conformations of the β-casomorphin-8 molecule were found, the dihedral angles of the leading and side chains of amino acid residues included in the molecule were found, and the energy of intra- and intersubstance interactions was estimated. It has been shown that six structural types represent the spatial structure of the          β-casomorphin-8 molecule. It can be assumed that the molecule performs its physiological functions in these structures. These three-dimensional structures make it possible to propose synthetic analogs for a given molecule. The results obtained can be used to elucidate the structural and structural-functional organization of casomorphin molecules.

Author Biography

Namiq Abdulavval Akhmedov, Baku State University, Institute for PhysicalProblems

Baku State University, Institute for Physical Problems, Department of Biophysics, Doctor of Physical and Mathematical Sciences, Associate Professor

References

References

E.A. Chesnokova, N.Y. Sarycheva, V.A. Dubynin, A.A. Kamensky. Food-Derived Opioid Peptides and Their Neurological Impact, Advancesin Physiological Sciences, 2015, 46, 22-46.

Swati Garg, Kulmira Nurgali, Vijay Kumar Mishra, Food Proteins as Source of Opioid Peptides-A Review, Curr.Med.Chem, 2016, 23, 893-910. DOI: 10.2174/0929867323666160219115226

V.A. Dubynin, Exorphins:possible biological and clinical significance, Psychiatry. 2010, 45, 65-73.

N.A. Akhmedov, Theoretical conformation analysis of β- cazomorphin, valmuceptin and morphiceptin molecules, Molecular Biol., 1989, 23, 240–248.

N.A. Akhmedov, N.M. Godjaev, E.V. Suleymanova, et al. Structural organization of the [Met] encephalin and endorphins molecules, J. Bioorganic. Chem., 1990, 16, 649–667.

N.A. Akhmedov, L.I. Ismailova, R.M. Abbasli, et al, Spatial Structure of Octarphin molecule, IOSR. J Appl Phys (IOSR-JAP), 2016, 8, 66–70.

N.A. Akhmedov, R.M. Abbasli, L.N. Agayeva, et al. Three-dimensional structure of exorpin B5 molecule. Conference proceedings Modern Trends in Physics, 2019, 201–204.

N.A. Akhmedov, L.N. Agayeva, G.A. Akverdieva et al. Spatial structure of the ACTH-(6-9)-PGP molecule, J.Chem.Soc.Pak., 2021, 43, 500–504. https://jcsp.org.pk/

N.A. Akhmedov, L.N. Agayeva, S.R. Akhmedova, et al. Spatial structure of the β- Casomorphin-7 molecule. IOSR J Appl Phys (IOSR-JAP) E-ISSN: 2278-4861. 2021, 13, 62–67. DOI: 10.9790/4861-1305026267

L.N. Agayeva, A.A. Abdinova, S.R. Akhmedova, et al. The spatial structure of the ACTH-(7–10) molecule, Biophysics, 2021, 66, 531–534. doi: 10.1134/S0006350921040023

Sh.N. Gadjieva, N.A. Akhmedov, E.A. Masimov, et al. Spatial structure of Thr-Pro-Ala-Glu-Asp-Phe-Met-Arg-Phe-NH2 molecule, Biophysics, 2013, 58, 587–590. doi: 10.1134/S0006350913040052

N.A. Akhmedov, L.N. Agayeva, R.M. Abbasli, et al. Spatial structure of casoxin a molecule. Topical issues of biological physics and chemistry, Russ J Biol Phys & Chem., 2021, 6, 62–68.

N.A. Akhmedov, L.N. Agayeva, R.M. Abbasli, L.I. Ismailova, Computer modeling of low-energy spatial structures of casoxin G molecule. Proceedings of the 8 th International Conference on control and optimization with industrial applications applications, 2022, I, 63-65.

L.N. Agayeva, A.A. Abdinova, S.R. Akhmedova, et al. Spatial structure of Soymorphin-6 molecule, Biophyics, 2023, 68, 1122–1127. doi: 10.1134/S0006350923060027

L.I. Ismailova, G.A. Akverdieva, S.D. Demukhamedova, et al. Molecular modelling of Pro-Gly gliproline and its complexes, Mosc Univ Phys Bull, 2023,78, 668–680. doi: 10. 3103/S0027134923050077

N.A. Akhmedov, L.N. Agayeva, R.M. Abbasli, et al. Spatial structure of Casoxin C Molecule, Biophyics, 2024, 69, 1122–1127.

L.N. Agayeva, L.I. Ismailova, N.A. Akhmedov, Spatial structure of the exorphin B4 molecule, Baku State University Journal of Physics & Space Sciences, 2024, 1, 30-36.

L.I. Ismailova, N.A. Akhmedov, Spatial structure of the heptapeptide analog of Nociceptin molecule, Mediterranean Journal of Chemistry, 2024, 14, 105-111.

L.N.Agayeva, N.A. Akhmedov, G.T. Imanova, Spatial Structure of the Casoxin D Molecule, Materials Research Innovations, Journal homepage: www.tandfonline.com/journals, 2024, DOI:10.1080/14328917.2024.2342013,To link to this article: https://doi.org/10.1080/14328917.2024.2342013 Published online. .

IUPAC-IUB. Quantities, Units and Symbols in Physical Chemistry, 1993, Blackwell Scientific Publications, Oxford.

Downloads

Published

2025-03-12 — Updated on 2025-03-12

Versions

Issue

Section

Bioinorganic Chemistry
Loading...